مراودۀ ژنی در نواحی هیبریداسیون بین زیرگونه‌های موش خانگی (M. m. castaneus و M. m. domesticus) با استفاده از ژنوم ناحیۀ D-loop میتوکندری

منابع

Barton, N. H. and Hewitt, G. (1985) Analysis of hybrid zones. Annual Review of Ecology and Systematics 113-148.

Bonhomme, F., Orth, A., Cucchi, T., Rajabi-Maham, H., Catalan, J., Boursot, P. and Britton-Davidian, J. (2011) Genetic differentiation of the house mouse around the Mediterranean basin: matrilineal footprints of early and late colonization. Proceedings of the Royal Society B-Biological Sciences278(1708): 1034-1043.

Boursot, P., Auffray, J. C., Britton-Davidian, J. and Bonhomme, F. (1993) The evolution of house mice. Annual Review of Ecology and Systematics 24: 119-152.

Bradshaw Jr, H., WIlbert, M. and Otto, K. (1995) Genetic mapping of floral traits associated with reproductive isolation in. Nature 376: 1-3.

Burch, C. L. and Chao, L. (1999) Evolution by small steps and rugged landscapes in the RNA virus ϕ6. Genetics 151(3): 921-927.

Coyne, J. A. and Orr, H. A. (2004) Speciation. Sinauer Associates, Inc., Sunderland.

Dieckmann, U. and Doebeli, M. (2004) Adaptive dynamics of speciation: sexual populations. Adaptive Speciation: 76-111.

Gompert, Z., and Buerkle, C. (2010) INTROGRESS: a software package for mapping components of isolation in hybrids. Molecular Ecology Resources10(2): 378-384.

Gompert, Z. and Buerkle, C. (2009) A powerful regression based method for admixture mapping of isolation across the genome of hybrids. Molecular Ecology18(6): 1207-1224.

Guenet, J. L. and Bonhomme, F. (2003) Wild mice: an ever-increasing contribution to a popular mammalian model. Trends Genetics 19(1): 24-31.

Huson, D. H. and Bryant, D. (2006) Application of phylogenetic networks in evolutionary studies. Molecular Biology and Evolution 23(2): 254-267.

Lenski, R. E., Rose, M. R., Simpson, S. C. and Tadler, S. C. (1991) Long-term experimental evolution in Escherichia coli. I. Adaptation and divergence during 2,000 generations. American Naturalist 131: 1341-1345.

Lexer, C., Buerkle, C., Joseph, J., Heinze, B. and Fay, M. (2007) Admixture in European Populus hybrid zones makes feasible the mapping of loci that contribute to reproductive isolation and trait differences. Heredity 98(2): 74-84.

Librado, P. and Rozas, J. (2009) DnaSP v5: a software for comprehensive analysis of DNA polymorphism data. Bioinformatics 25(11): 1451-1452.

Macholán, M., Baird, S. J., Dufková, P., Munclinger, P., Bímová, B. V. and Piálek, J. (2011) Assessing multilocus introgression patterns: a case study on the mouse X chromosome in central Europe. Evolution65(5): 1428-1446.

Malécot, G. and Blaringhem, L. (1948) Les mathématiques de l'hérédité. Masson & Cie, Paris.Manni, F., Guerard, E. and Heyer, E. (2004) Geographic patterns of (genetic, morphologic, linguistic) variation: how barriers can be detected by using Monmonier's algorithm. Human Biology 76(2): 173-190.

Martin, N. H., Sapir, Y. and Arnold, M. L. (2008) The genetic architecture of reproductive isolation in Louisiana irises: pollination syndromes and pollinator preferences. Evolution62(4): 740-752.

Minder, A. and Widmer, A. (2008) A population genomic analysis of species boundaries: neutral processes, adaptive divergence and introgression between two hybridizing plant species. Molecular Ecology17(6): 1552-1563.

Nolte, A., Gompert, Z. and Buerkle, C. (2009) Variable patterns of introgression in two sculpin hybrid zones suggest that genomic isolation differs among populations. Molecular Ecology 18(12): 2615-2627.

Prager, E. M., Orrego, C. and Sage, R. D. (1998) Genetic variation and phylogeography of central Asian and other house mice, including a major new mitochondrial lineage in Yemen. Genetics150: 835-861.

Rajabi-Maham, H., Orth, A., Siahsarvie, R., Boursot, P., Darvish, J. and Bonhomme, F. (2012) The south-eastern house mouse Mus musculus castaneus (Rodentia: Muridae) is a polytypic subspecies. Biological Journal of the Linnean Society107(2): 295-306.

Siahsarvie, R., Auffray, J. C., Darvish, J., Rajabi Maham, H., Yu, H. T., Agret, S. and Claude, J. (2012) Patterns of morphological evolution in the mandible of the house mouse Mus musculus (Rodentia: Muridae). Biological Journal of the Linnean Society 105(3): 635-647.

Tamura, K., Peterson, D., Peterson, N., Stecher, G., Nei, M. and Kumar, S. (2011) MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Molecular Biology and Evolution28(10): 2731-2739.